This is a protein chemist’s depiction of the calcium-sensing region in two engineered STIM1 protein variants. The sites that were altered are highlighted in each case as red spheres. The behavior of these two engineered proteins provided key insights into how STIM1 detects changes in calcium levels. [Dr. Patrick Hogan, La Jolla Institute for Immunology]
Scientists at the La Jolla Institute for Immunology (LJI) have reported additional work on how calcium-sensing protein STIM1 signals that it’s time to initiate calcium retrieval and then relays that message to the calcium channel ORAI. This research, says the team, lays the groundwork for novel ways to manipulate aberrant calcium signaling in the immune system, particularly in the context of autoimmune or inflammatory disease.

“We’ve known for a decade that STIM1 protein moved toward the plasma membrane to open ORAI channels when ER calcium levels drop,” says Patrick Hogan, Ph.D., a professor in the division of signaling and gene expression. “Our recent work shows how the STIM machinery functions on a molecular level. Understanding these mechanisms is critical, as calcium is important for a panoply of immune responses.”

The researchers’ current work (“Calcium sensing by the STIM1 ER-luminal domain”) appears in Nature Communications while an earlier study (“Coiled-Coil Formation Conveys a STIM1 Signal from ER Lumen to Cytoplasm“), which was published in Cell Reports, revealed how STIM1 protein elongates as it switches from a resting to an activated state when calcium reserves drop.

STIM1 is a transmembrane protein that spans the ER wall: one end pokes a calcium-sensing dipstick-like tail inside the reserve; in a resting, calcium-replete state, the other arm juts out from the ER but remains tucked up against the ER wall, out of touch with dormant ORA1 channels that dot the cell membrane.

The group defined what happens when calcium levels fall by constructing and testing the behavior of genetically-modified STIM1 proteins in cultured cells. Analysis showed that calcium loss from the sensor tail caused the membrane-spanning regions of pairs of STIM1 proteins to pull together inside the ER wall, prompting the outer arms to extend toward the cell membrane. That shape change brought STIM1 close enough to ORAI channels to reach out and open them, allowing calcium to flow back into cells.

“The first paper showed how STIM1 communicates with a channel protein in the plasma membrane via a structural change,” says Dr. Hogan. “Our latest paper takes that process a step back in time and reveals how calcium loss inside the ER initiates that change.”

Put simply, the more recent paper focuses on the workings of STIM1’s calcium-sensing dipstick. Previously, protein chemists found that calcium inside the ER binds to a structural motif in the STIM1 tail called an “EF-hand” and proposed that when the hand was empty, STIM1 activated ORAI. Aparna Gudlur, Ph.D., an instructor in Dr. Hogan’s lab and the new paper’s first author, explains that it isn’t quite that simple. “We now report that multiple calciums bind not only to the EF-hand but to other sites in the STIM1 ER domain, and that the sites depend on each other,” she says. “That revises the concept of how STIM1 gets activated.”

Not only that, but according to Dr. Hogan, the prevailing belief had been that calcium dissociation causes STIM1’s dipstick-like region inside the ER to unfold dramatically and assume a chaotic structure, a disorderliness deemed necessary for ORAI activation. “We now show that when calcium is low in the ER this region doesn’t unfold but instead acquires a novel but stable structure that favors interaction with the ORAI channel,” he says. “That’s important because it means that interaction could be targeted by inhibitors.”

Drug companies have already sought to develop drugs to block ORAI calcium channels as a means to halt calcium-dependent immune responses in autoimmune disease or in inflammatory conditions like acute pancreatitis. Some ORAI-blocking drugs are currently in Phase I and II clinical trials and thus far appear nontoxic. But their therapeutic potential remains unknown.

Dr. Gudlur speculates that developing direct ORAI/STIM1 blockers as therapies may be just an initial step, as both proteins are common to many cell types. “Targeting ORAI channels as a way to block excess calcium signaling only in certain cells may require greater specificity,” she says. “Our work is a first step in identifying cell-specific factors capable of modulating ORAI/STIM1 activity. Once we find them, drug screens targeting those factors would be called for.”

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