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Search Results - Whole-Genome Analysis
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  • Multitasking Multiplex Assays
    ... An aqueous-based system allows processing and analysis of FFPE samples. "FFPE tumor blocks ... NGS, which looks at the whole genome, or large elements of it, instead of just a few ...
    10-15-2013
  • Pan-Cancer Initiative: Patterns Emerge across Diverse Tumor Types
    the authors report observing whole-genome doubling in 37% of cancers, associated ... In the first commentary ("The Cancer Genome Atlas Pan-Cancer analysis project"), an ...
    9-26-2013
  • Global Genomics Group Enlists Illumina for Cardiovascular Disease...
    Per the agreement, Illumina will conduct whole-genome sequencing (WGS) in the GLOBAL ... This phenotyping is combined with a pan-omic analysis, and the data is then analyzed ...
    9-25-2013
  • BGI Subsidiary Joins San Antonio 1000 Cancer Genome Project
    Samples will also be available for further research in RNA and protein analysis intended ... SA1kCGP is conducting whole-genome sequencing of cancerous and normal tissue and blood ...
    9-12-2013
  • Controlled Access to HeLa Cell Genome Allowed with Lacks Family...
    ... The Nature issue that carries the NIH announcement also includes a whole genome analysis of the CCL-2 strain of HeLa cells, authored by a research team headed by Jay Shendure, ...
    8-7-2013
  • Diving Deep with Array CGH
    ... Magnani's groups used the DNA isolated from the blastocyst fluid for whole-genome ... This marked the first time genome-wide array CGH analysis was applied to perform a ...
    8-1-2013
  • Life Tech, FDA Ink Five-Year Food Safety Agreement
    Life Tech bioinformaticists will analyze the resulting data and provide FDA with tests for further validation and analysis. The firm added that whole-genome sequences generated ...
    7-30-2013
  • Ignyta Snaps Up Actagene, Branches into Cancer Rx/Dx
    Ignyta's existing team, platform and capabilities, such as whole genome methylation analysis, next-generation sequencing, Methylome(tm) database, and bioinformatics expertise. ...
    5-20-2013
  • Avoiding "Incidental" Damages
    ... given that it was not necessary to have carried out the analysis in the first place." ... for fully informed consent in clinical whole-genome sequencing, but didn't offer details. ...
    5-15-2013
  • Somatic Mutation Links Port-Wine Birthmarks, SWS, and Melanoma...
    whose affected and unaffected tissue and blood samples underwent whole-genome sequencing. In a separate analysis, researchers detected the mutation in 23 of 26 tissue samples from ...
    5-8-2013
  • Biomarkers Take Center Stage
    ... to develop tests, we improved data-analysis algorithms to reproducibly obtain ... Laser-captured tumor samples will be subjected to low passage whole-genome, exome, and RNA ...
    5-1-2013
  • Comparative Genomics: Insights into Disease Susceptibility
    ... Comparison of the software with other mapping software and variant-calling methods has shown that the MGRC approach to the analysis of whole-genome data is robust, cost-effective, ...
    5-1-2013
  • Ingenuity, Affymetrix Pair Products to Curb Microarray Bottlenecks
    and interpret their study data using Ingenuity Variant Analysis (to identify causal variants from the output of whole-genome and exome sequencing experiments) and iReport (to be ...
    4-8-2013
  • Querying the Cancer Transcriptome
    ... Park. Genomic reads from whole-genome sequencing data containing transposable elements ... Park. This analysis, performed in dozens of cancer samples, allowed identification of many ...
    4-1-2013
  • Computational Bio Problem Solving
    Computational biology involves the analysis, management, and visualization of cellular ... panel of 40-50 genes-let alone a whole genome or whole exome sequence-is still a lot ...
    4-1-2013
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    Journal Articles

  • Analysis of Campylobacter jejuni Whole-Genome DNA Microarrays...
    Mark A. Harrison, Mark D. Englen, Lauren G. Pittenger, Jonathan G. Frye, Victoria McNerney, Jaxk Reeves, Jovita Haro, Paula J. Fedorka-Cray
    Foodborne Pathogens and Disease
    Analysis of Campylobacter jejuni Whole-Genome DNA Microarrays: Significance of Prophage and Hypervariable Regions for Discriminating Isolates Foodborne Pathogens and Disease ...
  • Analysis of Metabolic Evolution in Bacteria Using Whole-Genome...
    William A. Bryant, Ali A. Faruqi, John W. Pinney
    Journal of Computational Biology
    Analysis of Metabolic Evolution in Bacteria Using Whole-Genome Metabolic Models Journal of Computational Biology MOTIVATION: Recent advances in the automation of metabolic model ...
  • Advanced Technology for Storage and Transport of Purified DNA...
    Jennifer Morgan, Jeremy Bullough, Laura Hammond, Heather M. Martinez, Mariluz P. Mojica Henshaw, Michael Hogan, Paul P.J. Dunn, Linda L. Kelley
    Biopreservation and Biobanking
    Advanced Technology for Storage and Transport of Purified DNA from Umbilical Cord Blood Prior to Use in Human Leukocyte Antigens Typing and Whole-Genome Microarray Analysis ...
  • Transcriptome Analysis of Organisms with Food Safety Relevance
    Supraja Puttamreddy, Michael D. Carruthers, Melissa L. Madsen, F. Chris Minion
    Foodborne Pathogens and Disease
    1) a short history and description of microarrays and 2) a discussion of studies involving bacterial food safety pathogens that focused on whole genome transcript analysis. ...

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