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Search Results - Whole-Genome Analysis
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  • Controlled Access to HeLa Cell Genome Allowed with Lacks Family...
    ... The Nature issue that carries the NIH announcement also includes a whole genome analysis of the CCL-2 strain of HeLa cells, authored by a research team headed by Jay Shendure, ...
    8-7-2013
  • Diving Deep with Array CGH
    ... Magnani's groups used the DNA isolated from the blastocyst fluid for whole-genome ... This marked the first time genome-wide array CGH analysis was applied to perform a ...
    8-1-2013
  • Life Tech, FDA Ink Five-Year Food Safety Agreement
    Life Tech bioinformaticists will analyze the resulting data and provide FDA with tests for further validation and analysis. The firm added that whole-genome sequences generated ...
    7-30-2013
  • Ignyta Snaps Up Actagene, Branches into Cancer Rx/Dx
    Ignyta's existing team, platform and capabilities, such as whole genome methylation analysis, next-generation sequencing, Methylome(tm) database, and bioinformatics expertise. ...
    5-20-2013
  • Avoiding "Incidental" Damages
    ... given that it was not necessary to have carried out the analysis in the first place." ... for fully informed consent in clinical whole-genome sequencing, but didn't offer details. ...
    5-15-2013
  • Somatic Mutation Links Port-Wine Birthmarks, SWS, and Melanoma...
    whose affected and unaffected tissue and blood samples underwent whole-genome sequencing. In a separate analysis, researchers detected the mutation in 23 of 26 tissue samples from ...
    5-8-2013
  • Biomarkers Take Center Stage
    ... to develop tests, we improved data-analysis algorithms to reproducibly obtain ... Laser-captured tumor samples will be subjected to low passage whole-genome, exome, and RNA ...
    5-1-2013
  • Comparative Genomics: Insights into Disease Susceptibility
    ... Comparison of the software with other mapping software and variant-calling methods has shown that the MGRC approach to the analysis of whole-genome data is robust, cost-effective, ...
    5-1-2013
  • Ingenuity, Affymetrix Pair Products to Curb Microarray Bottlenecks
    and interpret their study data using Ingenuity Variant Analysis (to identify causal variants from the output of whole-genome and exome sequencing experiments) and iReport (to be ...
    4-8-2013
  • Querying the Cancer Transcriptome
    ... Park. Genomic reads from whole-genome sequencing data containing transposable elements ... Park. This analysis, performed in dozens of cancer samples, allowed identification of many ...
    4-1-2013
  • Computational Bio Problem Solving
    Computational biology involves the analysis, management, and visualization of cellular ... panel of 40-50 genes-let alone a whole genome or whole exome sequence-is still a lot ...
    4-1-2013
  • Advertorial: Axeq Technologies
    ... Axeq shares the expertise of Macrogen in high depth human whole-genome resequencing and analysis capabilities including SNV, CNV, and other structural variations. As a participant ...
    4-1-2013
  • Clinical NGS Takes Step Forward
    for gene panel, exome, and whole-genome data sets. Through the combined offering, Ingenuity will provide content and software for the analysis and biological interpretation of ...
    3-19-2013
  • Gene Expression Analysis Making Inroads
    Advances in genomics technology have made sequence analysis of diverse organisms routine. Scientists armed with whole genome sequence data can now ask questions about genome ...
    3-15-2013
  • Molecular Characterization of CTCs
    ... For molecular analysis, the samples typically are lysed to recover DNA or RNA content from the cells. Amplification (whole genome or targeted pre-amplification) is sometimes ...
    3-15-2013
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    Journal Articles

  • Comparative Genome Analysis of Ciprofloxacin-Resistant Pseudomonas...
    Hsun-Cheng Su, Jainab Khatun, Dona M. Kanavy, Morgan C. Giddings
    Microbial Drug Resistance
    To answer these questions, we performed 454 pyrosequencing and a whole genome analysis both before and after exposure to ciprofloxacin. The comparative sequence data revealed 93 ...
  • A Sequence-Based Variation Map of Zebrafish
    Ashok Patowary, Ramya Purkanti, Meghna Singh, Rajendra Chauhan, Angom Ramcharan Singh, Mohit Swarnkar, Naresh Singh, Vikas Pandey, Carlos Torroja, Matthew D. Clark, Jean-Pierre Kocher, Karl J. Clark, Derek L. Stemple, Eric W. Klee, Stephen C. Ekker, Vinod Scaria, Sridhar Sivasubbu
    Zebrafish
    reference genome project, the whole genome sequence of a wild zebrafish at 39-fold genome coverage was determined. Comparative analysis with the zebrafish reference genome ...
  • Depolarization alters phenotype, maintains plasticity of pre...
    Sarah Sundelacruz, Michael Levin, David L. Kaplan
    Tissue Engineering, Part A
    Whole genome transcript analysis revealed several pathways that may mediate the effects of voltage signaling on cell state and will require detailed mechanistic inquiry. The ...
  • Microarray Analysis of Temperature-Induced Transcriptome of Streptococ...
    Xiaotao Zeng, Yuan Yuan, Yan Wei, Hua Jiang, Yuling Zheng, Zhaobiao Guo, Jiaqi Tang, Ruifu Yang, Dongsheng Zhou, Yongqiang Jiang
    Vector-Borne and Zoonotic Diseases
    Microarray Analysis of Temperature-Induced Transcriptome of Streptococcus suis Serotype 2 ... Herein, a whole-genome DNA microarray was used to investigate the global transcriptional ...

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