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Search Results - Ensemble for Biology

  • Macrocycles Shake Up Small Molecules
    ... For example, scientists at Ensemble have successfully pursued research investigations to ... Insights from Parasites In the field of chromatin biology, small molecules have also ...
    6-15-2013
  • Informatics Platform
    The Ensemble for Biology platform can aid biologists in analysis, screening, and visualization. It incorporates the ability to search across experiments, compare multiple assay ...
    9-1-2012
  • Systems Biology Delivers Higher Level Analysis
    ... This concept challenges the classical notion in molecular biology that a gene encodes a ... not encode for a structure but for an ensemble of structures, and this ensemble of ...
    12-1-2011
  • Timing Is Everything in Studying Disorderly Proteins
    ... Ph.D., associate professor, department of molecular biology, California campus of Scripps. ... many conventional ensemble experiments that average properties of millions of molecules. ...
    3-14-2011
  • Researchers Find Novel Mechanism for How Ligands Manage Cell...
    Nettles is excited by the possibility of working with an ensemble of ligand conformations, ... to transform how we think about chemical biology." Researchers Find Novel Mechanism for ...
    10-8-2010
  • Ion Channels Open Doors to New Drugs
    ... including the way of recording a single cell per well or ensemble recording in parallel. ... David Weaver, Ph.D., director at Vanderbilt Institute of Chemical Biology HTS, has been ...
    6-15-2010
  • Modeling Ensemble Powers Systems Biology
    As we entered the 21st century, biology was rapidly evolving from its classic reductionist ... We witnessed the emergence of systems biology, which offered a radical new way of ...
    2-15-2009
  • Epigenomics Rises as Key Research Tool
    Animal models have guided fundamental questions relevant for human biology. Particularly ... human-imprinted genes and their ensemble of imprint regulatory elements: the imprintome. ...
    2-1-2009
  • Biomarker Assay Use Increases
    ... The ensemble approach is based on identifying several such partitions and aggregating the ... from genomics, statistics, molecular biology, bioinformatics/computational biology, ...
    10-1-2008
  • Surmounting Small Molecule Challenges
    ... researchers at Ensemble Discovery are designing macrocycle compound collections. "David Liu, Ph.D., professor of chemistry and chemical biology, devised a way to use DNA ...
    3-15-2008
  • Evaluating Data Flow in Systems Biology
    is recognized by the Computational Biology Center at IBM (www.research.ibm.com). "We ... IBM's approach emphasizes 2-D algorithms and ensemble methods in the analysis of LC-MS ...
    3-15-2007
  • Target Screening Focuses on Ion Channels
    It is a second-generation technology that records the ensemble current from up to 64 cells ... said Tito Gonzalez, senior director of biology. This technology is a real game changer. ...
    6-1-2006
  • In Silico Modeling Begins to Produce Results
    ... The user selects the best ensemble for the final predictive model and sends it to Admet ... they do in the lab, according to David Edwards, Ph.D., director of computational biology. ...
    9-1-2005
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    Journal Articles

  • Effective Classification of MicroRNA Precursors Using Feature...
    Ling Zhong, Jason T. L. Wang, Dongrong Wen, Virginie Aris, Patricia Soteropoulos, Bruce A. Shapiro
    OMICS: A Journal of Integrative Biology
    OMICS: A Journal of Integrative Biology MicroRNAs (miRNAs) are non-coding RNAs ... to obtain classification models, based on which classifier ensemble is constructed. ...
  • An Efficient Algorithm for Upper Bound on the Partition Function...
    Hamidreza Chitsaz, Elmirasadat Forouzmand, Gholamreza Haffari
    Journal of Computational Biology
    Journal of Computational Biology It has been shown that minimum free energy structure for ... In contrast, ensemble based quantities such as melting temperature and equilibrium ...
  • Efficient Traversal of Beta-Sheet Protein Folding Pathways Using...
    Bonnie Berger, Jérôme Waldispühl, Solomon Shenker, Charles W. O'Donnell, Srinivas Devadas, Jerome Waldispuhl
    Journal of Computational Biology
    Efficient Traversal of Beta-Sheet Protein Folding Pathways Using Ensemble Models Journal of Computational Biology Abstract Molecular dynamics (MD) simulations can now predict ...
  • A General Modeling Strategy for Gene Regulatory Networks with...
    Andre Ribeiro, Rui Zhu, Stuart A. Kauffman
    Journal of Computational Biology
    Dynamics Journal of Computational Biology A stochastic genetic toggle switch model ... is proposed for an ensemble approach to study the dynamical properties of these networks. ...

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